BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B08LP1|AL429170
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig903 1590 0.0
>3x_Contig903
Length = 4000
Score = 1590 bits (799), Expect = 0.0
Identities = 837/853 (98%)
Strand = Plus / Minus
Query: 1 gatccattggaaaatgacccgtggtgattcccatccaatgttcatccgcgctagtttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2213 gatccattggaaaatgacccgtggtgattcccatccaatgttcatccgcgctagtatgcc 2154
Query: 61 gccagcgggttgatttgtagctccagtttcagcattggggttaggcaagttgggaagtag 120
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2153 gccagctggttgatttgtagctccagtttcagcattggggttaggcaagtcgggaagtag 2094
Query: 121 ttcttcgtctacattatactgtacttcattgcgttgaatcttttcgccaagagcgttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 ttcttcgtctacattatactgtacttcattgcgttgaatcttttcgccaagagcgttttc 2034
Query: 181 tatcgctgctcttgcagttccagacaacttcatacatttctctcccaaggtgatttcgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 tatcgctgctcttgcagttccagacaacttcatacatttctctcccaaggtgatttcgtc 1974
Query: 241 cttagagagccttaaggtcttgtcgccaatttgtagctcgaaatactgggcggccaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 cttagagagccttaaggtcttgtcgccaatttgtagctcgaaatactgggcggccaactg 1914
Query: 301 tgactgtkgtataatgtagttttgatcgtctacagttatgcgttcataagtttcatacga 360
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1913 tgactgtggtataatgtagtcttgatcgtctacagttatgcgttcataagtctcatacga 1854
Query: 361 ccttgtcactggcaatccatcagtyattagaatgggaacttctggctccgtgagaacggc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1853 ccttgtcactggcaatccatcagtcattagaatgggaacttctggctccgtgagaacggc 1794
Query: 421 tgaagtycttgttggtgtggcagttggtgttggtgacctagaatttgttgtttgttgcaa 480
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1793 tgaagtccttgttggtgtggcagtaggtgttggtgacctagaatttgttgtttgttgcaa 1734
Query: 481 ttgatttgaattgtggttcaaatcattttcagacctattagataacgtcgaaccgaatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 ttgatttgaattgtggttcaaatcattttcagacctattagataacgtcgaaccgaatgc 1674
Query: 541 ggaattggcagccaggttaggcccgctagtgactgcgatatttggaacggactgtcttgc 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 ggaattggcagctaggttaggcccgctagtgactgcgatatttggaacggactgtcttgc 1614
Query: 601 attaccagctgatgtgaaagtattagtgttgctggtggaagtgcttgtattgacattgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 attaccagctgatgtgaaagtattagtgttgctggtggaagtgcttgtattgacattgtt 1554
Query: 661 attgttgccatttgagttacctcttcttggcatgaattcaaatctgtyaggagcgaacaa 720
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1553 attgttgccatttgagtcacctcttcttggcatgaattcaaatctgtcaggagcgaacaa 1494
Query: 721 taactcattccaaaatcctggccccggctccgagtattcgtgggttatgtgaacatgtaa 780
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1493 taactcattccaaaatcctggccccggctccgagtattcgtgggtaatgtgaacatgtaa 1434
Query: 781 cttggctcccgtagtttcagtaatgaatttcaaaatcctattcggttcattagatgcgcc 840
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 cttggctcccgtaggttcagtaatgaatttcaaaatcctattcggttcattagatgcgcc 1374
Query: 841 aatyaattcatgt 853
| | |||||||||
Sbjct: 1373 attcaattcatgt 1361
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5117
Number of Sequences: 1807
Number of extensions: 5117
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)